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Title 

Application of internal transcribed spacer of nuclear ribosomal DNA for identification of Echinops mandavillei Kit Tan

Authors 

F M A Al-HemaidM A AliJoongku LeeG GyulaiA K Pandey

Publisher 

Bangladesh Association of Plant Taxonomists

Issue Date 

2014

Citation 

Bangladesh Journal of Plant Taxonomy, vol. 21, no. 1, pp. 33-42

Keywords 

AsteraceaeEchinops mandavilleiEndemicITSnrDNASaudi arabia

Abstract 

The present study explored the use of internal transcribed spacers (ITS) sequences (ITS1-5.8S-ITS2) of nuclear ribosomal DNA (nrDNA) for identification of Echinops mandavillei Kit Tan, an endemic species to Saudi Arabia. The sequence similarity search using Basic Local Alignment Search Tool (BLAST) and phylogenetic analyses of the ITS sequence of E. mandavillei Kit Tan showed high level of sequence similarity (98%) with E. glaberrimus DC. (section Ritropsis). The novel primary sequence and the secondary structure of ITS2 of E. mandavillei could have a potential use for molecular genotyping.

ISSN 

1028-2092

Link 

http://dx.doi.org/10.3329/bjpt.v21i1.19256

Appears in Collections

1. Journal Articles > Journal Articles

Registered Date

2019-05-02


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