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Title 

Stackebrandtia soli sp. nov., a novel actinobacterium isolated from a soil sample

Authors 

M J LiuC Z JinDong Jin ParkM D AsemM XiaoN SalamW J LiChang-Jin Kim

Publisher 

Society for General Microbiology

Issue Date 

2018

Citation 

International Journal of Systematic and Evolutionary Microbiology

Keywords 

Gosan recreation forestPolyphasic taxonomyStackebrandtia soli sp. nov

Abstract 

An aerobic actinobacterium, strain AN130378T, was isolated from a soil sample collected in Korea and subjected to taxonomic investigation using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequence data showed that strain AN130378T is a member of the genus Stackebrandtia, with sequence similarities of 97.3% to Stackebrandtia albiflava YIM 45751T and 97.1% to Stackebrandtia endophytica YIM 64602T. The whole-cell hydrolysates contained meso-diaminopimelic acid as the diagnostic diamino acid, and galactose, glucose and xylose. The major menaquinones were MK-11(H4), MK-10(H4) and MK-11(H6), while the major fatty acids were identified as iso-C15:0, anteiso-C17:0, anteiso-C15:0, iso-C17:0 and summed feature 3 (C16:1ω6c and/or C16:1ω7c). The polar lipids were identified as diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylmethylethanolamine, an unidentified aminophospholipid, four unidentified glycolipids, three unidentified phospholipids and two unidentified polar lipids. The G+C content of the genomic DNA was determined to be 67.7 mol%. All chemotaxonomic and genotypic data indicated that the strain belongs to the genus Stackebrandtia. On the basis of morphological, chemotaxonomic data and phylogenetic analysis, strain AN130378T is considered to represent a novel species within the genus Stackebrandtia, for which the name Stackebrandtia soli sp. nov. is proposed. The type strain is AN130378T (=DSM 103573T=KCTC 39809T).

ISSN 

1466-5026

Link 

http://dx.doi.org/10.1099/ijsem.0.002654

Appears in Collections

1. Journal Articles > Journal Articles

Registered Date

2019-05-02


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