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Title 

Complete genome sequence of a tentative new member of the genus Badnavirus identified in Codonopsis lanceolata

Authors 

Seungmo LimJeong Mee ParkSuk Yoon KwonHye Sun ChoHyun Soon KimS H LeeJae Sun Moon

Publisher 

Springer Verlag (Germany)

Issue Date 

2019

Citation 

Archives of Virology

Abstract 

High-throughput sequencing revealed a tentative new badnavirus infecting Codonopsis lanceolata, provisionally named Codonopsis vein clearing virus (CoVCV). The complete 8,112-nt CoVCV genomic DNA sequence (GenBank accession: MK044821) comprises three open reading frames (ORFs) encoding conserved domains, with typical features of badnaviruses. Additionally, BLASTn searches indicated the CoVCV genome sequence is most similar to the grapevine vein clearing virus (GVCV) genome (72% identity and 46% query coverage). Moreover, the polyprotein encoded in CoVCV ORF3 is most similar to the corresponding protein of GVCV, with 60% amino acid sequence identity (89% query coverage). These results suggest that CoVCV is a new member of the genus Badnavirus in the family Caulimoviridae.

URI 

https://doi.org/10.1007/s00705-019-04238-5

ISSN 

0304-8608

Appears in Collections

1. Journal Articles > Journal Articles

Registered Date

2019-07-10


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