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Title | Nocardioides kongjuensis sp. nov., an N-acylhomoserine lactone-degrading bacterium |
Authors | Jung-Hoon Yoon; Jung-Kee Lee; Seo-Youn Jung; Jung-Ae Kim; H K Kim; Tae Kwang Oh |
Publisher | Society for General Microbiology |
Issue Date | 2006 |
Citation | International Journal of Systematic and Evolutionary Microbiology, vol. 56, no. 8, pp. 1783-1787 |
Keywords | bacterial DNA; bacterial RNA; diaminopimelic acid; menaquinone; peptidoglycan; RNA 16S; bacterial cell wall; bacterial gene; bacterial growth; bacterial strain |
Abstract | A Gram-positive, rod- or coccoid-shaped and N-hexanoyl-L-homoserine lactone-degrading bacterial strain, A2-4T, was isolated from a soil in Korea, and its taxonomic position was investigated by using a polyphasic approach. Strain A2-4T grew optimally at pH 7.0-8.0 and 30 °C without NaCl. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain A2-4T is most closely related to members of the genus Nocardioides. Strain A2-4T possessed chemotaxonomic properties indicative of members of the genus Nocardioides; the cell-wall peptidoglycan type was based on LL-diaminopimelic acid, MK-8(H4) was the predominant menaquinone and iso-C16:0 was the predominant fatty acid. The DNA G+C content was 72.1 mol%. The 16S rRNA gene sequence of strain A2-4T was 98.3-99.1 % similar to those of the type strains of Nocardioides simplex, Nocardioides aromaticivorans and Nocardioides nitrophenolicus and 93.8-96.3 % similar to those of the type strains of other Nocardioides species. Strain A2-4T could be distinguished from the three phylogenetic relatives, N. nitrophenolicus, N. aromaticivorans and N. simplex, by DNA-DNA relatedness (25-42 %) and by differences in some phenotypic characteristics. On the basis of the phenotypic, phylogenetic and genetic data, the strain represents a novel species of the genus Nocardioides, for which the name Nocardioides kongjuensis sp. nov. is proposed. The type strain is A2-4T (=KCTC 19054T=JCM 12609T). |
ISSN | 1466-5026 |
Link | |
Appears in Collections | |
Registered Date |
2019-05-02 |
