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Title 

Comparative analysis of three indigenous plasmids from Xanthomonas axonopodis pv. glycines

Authors 

J G KimS ChoiJ OhJae Sun MoonI Hwang

Publisher 

Elsevier

Issue Date 

2006

Citation 

Plasmid, vol. 56, no. 2, pp. 79-87

Keywords 

avrBs3 homologbacterial pustuleplasmidxanthomonas axonopodis pv. glycinesxanthomonasplasmidssequence analysis, DNA

Abstract 

The complete nucleotide sequences of three representative plasmids, pAG1 from Xanthomonas axonopodis pv. glycines strain AG1, and pXAG81 and pXAG82 from strain 8ra, were determined. The sizes of pAG1, pXAG81, and pXAG82 are 15143, 26721, and 1315 base pairs, respectively. A possible 16, 34, and 1 open-reading frames (ORFs) are present in pAG1, pXAG81, and pXAG82, respectively. pAG1 could encode proteins homologous to AvrBs3, TnpA, TnpR, RepA, HtrA, ParA, M.XmaI, R.XmaI, and six hypothetical proteins. pXAG81 possibly encodes proteins homologous to those involved in conjugal plasmid transfer. Possible oriT sequences similar to those of RP4 were found between mobB and mobC homologs. At the end of the RepA homolog in pAG1 and pXAG81, a putative oriV region at the 3′-end of RepA similar to the integron TNCP23 in pKLC102 of Pseudomonas aeruginosa C strain was found. All 255 isolates carried either pAG1 type or pXAG81 type, and 217 isolates appeared to carry tra gene homologs. Both pAG1 and pXAG81 types contained an avrBs3 homolog varying from three copies in AG1 to eight copies in AG166.

ISSN 

0147-619X

Link 

http://dx.doi.org/10.1016/j.plasmid.2006.03.001

Appears in Collections

1. Journal Articles > Journal Articles

Registered Date

2017-04-19


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