상세 정보

underline
Metadata Downloads : dc(xml) or Excel
Cited 0 time in scopus ci

Title 

Localization of 5,105 hanwoo (Korean cattle) BAC clones on bovine chromosomes by the analysis of BAC end sequences (BESS) involving 21,024 clones

Authors 

J M ChoiS H ChaeS W KangD S ChoiY S LeeHong-Seog ParkJ S YeoI Choi

Publisher 

The Asian-australasian Association of Animal

Issue Date 

2007

Citation 

Asian-Australasian Journal of Animal Sciences, vol. 20, no. 11, pp. 1636-1650

Keywords 

BAC end sequence (BES)chromosomal mapKorean cattle (Hanwoo)bacteria (microorganisms)

Abstract 

As an initial step toward a better understanding of the genome structure of Korean cattle (Hanwoo breed) and initiation of the framework for genomic research in this bovine, the bacterial artificial chromosome (BAC) end sequencing of 21,024 clones was recently completed. Among these clones, BAC End Sequences (BESs) of 20,158 clones with high quality sequences (Phred score >20. average BES equaled 620 bp and totaled 23,585,814 bp), after editing sequencing results by eliminating vector sequences, were used initially to compare sequence homology with the known bovine chromosomal DNA sequence by using BLASTN analysis. Blast analysis of the BESs against the NCBI Genome database for Bos taurus (Build 2.1) indicated that the BESs from 13.201 clones matched bovine contig sequences with significant blast hits (E< accuracy. high very with chromosome bovine the to mapped were analysis, secondary from clones 1.052 and analysis primary 4.053 including hits, paired-end BAC cattle Korean of 5.105 total a Finally, hits. 6.126 hits single-end 7,075 40).>

ISSN 

1011-2367

Link 

http://dx.doi.org/https://doi.org/10.5713/ajas.2007.1636

Appears in Collections

1. Journal Articles > Journal Articles

Registered Date

2019-05-02


There are no files associated with this item.
qrcode

FusionCharts.
DSpace Software Coptright(c) 2010 MIT and Hewleft-Packard  /  KRIBB-REPOSITORY ( Email:jakim@kribb.re.kr)